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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3368709_3371606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3368709 - 3371606

Intron Length:

2898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCGGGG

5'SS Class:

major

3'SS Sequence:

CTGTCCTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TCCTGCTGAATG

Flanking Amino Acid:

FTCRPPALLKGNNSNLTCME

Intron Amino Acid Position:

1281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.2

51.3

45.5

Major BPS

72.5

0.56

1.2

63.4

Major PPT

78.8

0.65

0.8

76.5

Minor 5ss

40.2

-1.1

3.5

55.4

48.8

Minor BPS

49.3

-0.1

55.5

46.3

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259

ENSAPLT00000034510

3186393 - 3400860

214468