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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3371818_3372401_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3371818 - 3372401

Intron Length:

584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACGTACA

5'SS Class:

major

3'SS Sequence:

TCCGCACGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

CACTCACTAAAT

Flanking Amino Acid:

HVPGSSRKARKRAFKIQCTQ

Intron Amino Acid Position:

1351

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

74.6

35.6

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

47.4

-0.1

1.2

44.1

35.8

Minor 5ss

36.7

-1.5

2.9

43.3

37.8

Minor BPS

-0.1

64.61

44.9

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259

ENSAPLT00000034510

3186393 - 3400860

214468