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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3372574_3375978_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3372574 - 3375978

Intron Length:

3405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCATTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CTTCTCTCATTC

Flanking Amino Acid:

IKCEDDDNQSGRGSNVIHCR

Intron Amino Acid Position:

1409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

72.6

38.9

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

77.1

0.61

0.8

68.9

36.1

Minor 5ss

33.8

-1.8

45.5

42.6

Minor BPS

47.8

-0.1

1.8

59.33

40.3

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034510

3186393 - 3400860

214468

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259