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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3376127_3378719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3376127 - 3378719

Intron Length:

2593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCTGTGAG

5'SS Class:

major

3'SS Sequence:

ATTTTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

GTAGCTTTATCC

Flanking Amino Acid:

KLQCSGGYGIGAECTTSCLD

Intron Amino Acid Position:

1458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.3

64.9

41.2

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

78.5

0.64

73.4

41.3

Minor 5ss

33.5

-1.9

40.1

Minor BPS

54.9

0.13

1.7

63.66

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034510

3186393 - 3400860

214468

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259