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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3378830_3385688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3378830 - 3385688

Intron Length:

6859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TTTGTCTTAACT

Flanking Amino Acid:

QHWMNPQRVKSVVCTAGLKW

Intron Amino Acid Position:

1495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

76.7

33.6

Major BPS

77.1

0.67

77.9

32.2

Major PPT

85.3

0.79

0.7

77.4

31.4

Minor 5ss

29.4

-2.4

2.9

36.5

40.5

Minor BPS

83.6

1.13

1.2

95.32

31.5

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034510

3186393 - 3400860

214468

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000014795

3223614 - 3389872

166259