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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3389693_3400752_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3389693 - 3400752

Intron Length:

11060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGATG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTCAC

U12 Branch Point Sequence:

CCCTCCTTCACG

Flanking Amino Acid:

CCASTVKTKKVTPFPMSCDL

Intron Amino Acid Position:

1593

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.2

0.97

0.8

82.5

Major BPS

65.1

0.38

1.1

68.9

36.5

Major PPT

85.7

0.8

0.6

84.7

Minor 5ss

35.9

-1.6

3.3

47.8

47.9

Minor BPS

57.5

0.09

1.9

58.36

49.2

Associated Gene:

Gene:

PAPPA

Ensembl Gene ID:

ENSAPLG00000014198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028260

3223423 - 3401362

177940

ENSAPLT00000034510

3186393 - 3400860

214468