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Intron Name: Anas_platyrhynchos_platyrhynchos_18_348083_350890_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

348083 - 350890

Intron Length:

2808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

CTCTTTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATCAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

78.5

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.7

76.2

32.4

Minor 5ss

40.6

-1.1

2.8

58.6

39.3

Minor BPS

61.4

0.43

87.17

37.6

Associated Gene:

Gene:

RABL6

Ensembl Gene ID:

ENSAPLG00000015770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016481

301980 - 350891

48912