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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3500410_3501461_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3500410 - 3501461

Intron Length:

1052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTATC

5'SS Class:

major

3'SS Sequence:

TCCTCCTGCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GGGAGCTGATGT

Flanking Amino Acid:

LPNCSPLPQPILRLSPNVEP

Intron Amino Acid Position:

955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

78.4

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

71.7

0.49

0.9

64.4

36.5

Minor 5ss

41.7

-0.9

3.1

58.6

39.2

Minor BPS

36.5

-0.9

2.1

47.06

44.5

Associated Gene:

Gene:

ASTN2

Ensembl Gene ID:

ENSAPLG00000012315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005070

3413581 - 3696108

282528

ENSAPLT00000012819

3414895 - 3674609

259715

ENSAPLT00000005071

3413581 - 3696108

282528