Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_3520257_3522762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3520257 - 3522762

Intron Length:

2506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGACGG

5'SS Class:

major

3'SS Sequence:

TCTTTCTTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAT

U12 Branch Point Sequence:

TCTTTCTTGACA

Flanking Amino Acid:

LRGGRAARRLRIGALWNKCE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

53.7

45.1

Major BPS

62.2

0.3

1.1

68.9

Major PPT

82.4

0.73

0.9

79.7

32.4

Minor 5ss

26.4

-2.7

2.9

31.3

42.2

Minor BPS

0.91

1.1

81.71

33.5

Associated Gene:

Gene:

TRIM32

Ensembl Gene ID:

ENSAPLG00000017941

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025082

3520123 - 3524789

4667