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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3524790_3525142_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
3UTR

Intron Coordinates:
3524790 - 3525142

Intron Length:
353

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAGCCC

5'SS Class:
major

3'SS Sequence:
ACCTTCCTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTAAT

U12 Branch Point Sequence:
CCTTCCTTACAG

Flanking Amino Acid:
3UTR

Intron Amino Acid Position:
3UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1
63.8
40.7

Major BPS
82.2
0.8
0.9
81.6
27

Major PPT
79.5
0.66
0.8
72.5
31.6

Minor 5ss
31.4
-2.1
3.3
42.6
44.4

Minor BPS
55.7
0.04
1.9
60.06
47.5

Associated Gene:

Gene:
TRIM32

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3521124 - 3525389
4266