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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3534377_3534519_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3534377 - 3534519

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGGGCA

5'SS Class:

major

3'SS Sequence:

TGTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

AGAGTCTGAACG

Flanking Amino Acid:

EPLPDLQLLTGDIKYDEAMG

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

58.2

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

86.4

0.82

0.8

80.9

Minor 5ss

28.9

-2.4

3.6

38.8

46.5

Minor BPS

49.5

-0.1

1.6

52.15

Associated Gene:

Gene:

ASTN2

Ensembl Gene ID:

ENSAPLG00000012315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005071

3413581 - 3696108

282528

ENSAPLT00000005070

3413581 - 3696108

282528

ENSAPLT00000012819

3414895 - 3674609

259715