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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3534645_3548871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3534645 - 3548871

Intron Length:

14227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCCC

5'SS Class:

major

3'SS Sequence:

TTTGTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

TGCTTTGCAGTT

Flanking Amino Acid:

NQGQVFQMTFRENNFIKDFP

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

63.1

41.4

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

86.7

0.82

0.7

81.5

30.6

Minor 5ss

38.1

-1.3

3.2

51.2

45.5

Minor BPS

39.6

-0.7

2.1

55.62

41.6

Associated Gene:

Gene:

ASTN2

Ensembl Gene ID:

ENSAPLG00000012315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012819

3414895 - 3674609

259715

ENSAPLT00000005071

3413581 - 3696108

282528

ENSAPLT00000005070

3413581 - 3696108

282528