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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3560901_3590323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3560901 - 3590323

Intron Length:

29423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TTTCTCTCCAAG

Flanking Amino Acid:

VLVTEDPADVREEAMLSTYF

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

72.3

0.55

73.3

28.9

Major PPT

76.3

0.59

75.7

33.2

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

45.4

-0.5

2.1

58.13

43.2

Associated Gene:

Gene:

ASTN2

Ensembl Gene ID:

ENSAPLG00000012315

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005071

3413581 - 3696108

282528

ENSAPLT00000005070

3413581 - 3696108

282528

ENSAPLT00000012819

3414895 - 3674609

259715