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Intron Name: Anas_platyrhynchos_platyrhynchos_18_359259_359418_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

359259 - 359418

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CCTCTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCGCAG

U12 Branch Point Sequence:

CCTGCCGCAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.7

46.7

Major BPS

36.5

-0.8

1.6

42.9

Major PPT

79.5

0.66

0.7

73.1

25.1

Minor 5ss

32.9

-2

2.8

31.4

42.5

Minor BPS

-0.7

2.3

49.78

46.8

Associated Gene:

Gene:

RABL6

Ensembl Gene ID:

ENSAPLG00000015770

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044263

300033 - 364200

64168

ENSAPLT00000035708

300033 - 359586

59554