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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3804403_3811356_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3804403 - 3811356

Intron Length:

6954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTACA

5'SS Class:

major

3'SS Sequence:

ACTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

ATGTCTCTACTT

Flanking Amino Acid:

RAAACFQRTHGVYGDSMNAR

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

73.6

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

89.1

0.88

0.7

84.5

29.6

Minor 5ss

37.1

-1.5

47.4

41.4

Minor BPS

49.6

0.05

1.9

70.45

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023589

3803535 - 3819936

16402