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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3811454_3813554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3811454 - 3813554

Intron Length:

2101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TGCCTCTCCATT

Flanking Amino Acid:

WKRLVILLCVGLCMTELYYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

76.9

33.7

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

82.2

0.73

0.8

77.1

31.6

Minor 5ss

32.3

-2

2.9

32.2

42.1

Minor BPS

45.4

-0.2

1.9

61.72

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023589

3803535 - 3819936

16402

ENSAPLT00000013284

3810755 - 3819936

9182