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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3813610_3814273_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3813610 - 3814273

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTTAA

5'SS Class:

major

3'SS Sequence:

GTTCCTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GTTCCTTTTACA

Flanking Amino Acid:

YLMNTLESDVERHVGHVGAC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

73.9

32.9

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

85.6

0.8

79.7

32.4

Minor 5ss

40.8

-1

2.8

45.6

43.6

Minor BPS

64.1

0.44

1.6

73.8

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023589

3803535 - 3819936

16402

ENSAPLT00000013284

3810755 - 3819936

9182