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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3817885_3819339_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3817885 - 3819339

Intron Length:

1455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGATAT

5'SS Class:

major

3'SS Sequence:

TTTCCCTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

AAATGCTAAACA

Flanking Amino Acid:

KLLQLNASSRRYATMGIIAL

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

70.3

36.4

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

84.2

0.77

0.7

76.8

31.8

Minor 5ss

45.3

-0.5

2.9

56.1

48.1

Minor BPS

50.9

0.02

2.1

63.9

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023589

3803535 - 3819936

16402

ENSAPLT00000013284

3810755 - 3819936

9182