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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3819487_3819815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3819487 - 3819815

Intron Length:

329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TAATCTGTAACT

Flanking Amino Acid:

YNTGRSRKEELIQHNLTAEG

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

80.7

33.7

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

83.3

0.75

0.8

77.1

31.6

Minor 5ss

33.7

-1.9

3.3

47.7

Minor BPS

0.52

81.94

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012762

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023589

3803535 - 3819936

16402

ENSAPLT00000013284

3810755 - 3819936

9182