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Intron Name: Anas_platyrhynchos_platyrhynchos_18_3900896_3901630_R

Intron Information:

Intron Rank:

134519

Intron Class:

major

Intron Phase:

Intron Coordinates:

3900896 - 3901630

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTACCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTGATTTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.5

33.5

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

78.5

0.64

0.8

75.9

33.6

Minor 5ss

-1.6

3.2

49.9

46.5

Minor BPS

58.7

0.35

1.6

75.56

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019675

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038974

3899300 - 3901666

2367