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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4137458_4145992_R

Intron Information:

Intron Rank:

135551

Intron Class:

major

Intron Phase:

Intron Coordinates:

4137458 - 4145992

Intron Length:

8535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATCTTTTCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

36.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

91.9

0.94

0.6

88.3

21.4

Minor 5ss

-1

3.1

58.1

46.3

Minor BPS

0.32

1.5

68.17

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020351

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037929

4136405 - 4146205

9801