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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4298614_4305221_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4298614 - 4305221

Intron Length:

6608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TCTTTCTACATC

Flanking Amino Acid:

QSTESKLHLQGLQIIFPQYL

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

72.3

39.5

Major BPS

70.2

0.5

1.1

77.2

Major PPT

72.3

0.5

65.4

41.1

Minor 5ss

33.1

-1.9

3.2

43.3

44.4

Minor BPS

49.2

-0

2.1

64.76

Associated Gene:

Gene:

BRINP1

Ensembl Gene ID:

ENSAPLG00000006140

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006356

4285429 - 4342664

57236