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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4396839_4435256_F

Intron Information:

Intron Rank:

132718

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4396839 - 4435256

Intron Length:

38418

Sequence Information:

Terminal Dinucleotides:

GT-CC

5'SS Sequence:

CTG|GTAGTAAAC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTCCCC|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

CAAGTTTCAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.1

60.6

38.2

Major BPS

0.57

1.2

77.7

37.1

Major PPT

31.2

-1

4.3

70.1

41.4

Minor 5ss

32.6

-2

3.2

39.8

40.4

Minor BPS

43.3

-0.4

1.8

53.01

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043338

4396823 - 4452133

55311