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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4448925_4451705_F

Intron Information:

Intron Rank:

132717

Intron Class:

major

Intron Phase:

Intron Coordinates:

4448925 - 4451705

Intron Length:

2781

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCAA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTGCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

ACAGCAATAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

76.5

34.2

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

0.58

68.9

Minor 5ss

32.9

-2

40.7

45.5

Minor BPS

46.5

-0.2

1.9

55.96

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021338

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043338

4396823 - 4452133

55311

ENSAPLT00000041037

4440070 - 4452133

12064