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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4828064_4831361_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4828064 - 4831361

Intron Length:

3298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTTCG

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

CAGTATGTAATC

Flanking Amino Acid:

ENMEKVIIDQLVLTHDVLKK

Intron Amino Acid Position:

1928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.3

41.4

Major BPS

80.4

0.76

80.3

31.8

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

42.5

-0.8

2.7

51.6

44.8

Minor BPS

44.6

-0.4

2.1

51.58

40.3

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346