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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4833563_4835766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4833563 - 4835766

Intron Length:

2204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GATCCTTTGATA

Flanking Amino Acid:

GTKVQEPGIKVPDQASLHSF

Intron Amino Acid Position:

1833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

76.9

0.61

0.9

71.9

37.2

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

0.37

1.2

65.29

34.6

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346