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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4834305_4835766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4834305 - 4835766

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGGTGGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

AAGTTTTTAACT

Flanking Amino Acid:

GTKVQEPGIKR*

Intron Amino Acid Position:

1833

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.38

1.1

61.8

44.4

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

72.6

0.79

1.1

78.87

37.4

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041