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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4836221_4837476_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4836221 - 4837476

Intron Length:

1256

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACTGTGC

5'SS Class:

major

3'SS Sequence:

TTTTGATATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTAACTTATACT

Flanking Amino Acid:

QESQHYAGMNENLCKCPAAS

Intron Amino Acid Position:

1724

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.1

50.5

41.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.8

0.67

74.5

39.4

Minor 5ss

36.2

-1.6

3.5

47.6

43.4

Minor BPS

49.7

0.06

73.36

43.3

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346