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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4837726_4839096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4837726 - 4839096

Intron Length:

1371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAAATG

5'SS Class:

major

3'SS Sequence:

GAAATTGTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTCTTTTGAAAT

Flanking Amino Acid:

KLEEAKRKSTDPKCDASEEF

Intron Amino Acid Position:

1641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

70.5

39.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

62.5

0.28

1.1

46.7

Minor 5ss

42.5

-0.8

57.1

47.2

Minor BPS

60.9

0.42

1.5

77.37

39.2

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346