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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4841178_4845547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4841178 - 4845547

Intron Length:

4370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TATATATTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGACTCATAAAT

Flanking Amino Acid:

RQVTDKELDQGSANIFSRGS

Intron Amino Acid Position:

1498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

86.8

22.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

76.2

0.59

0.9

40.1

Minor 5ss

39.6

-1.2

3.1

55.7

48.5

Minor BPS

50.8

0.1

1.7

69.73

40.1

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346