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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4849661_4851603_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4849661 - 4851603

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCATTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTGCTTTCAAAG

Flanking Amino Acid:

QNKLREALPSKYDSLVHSQA

Intron Amino Acid Position:

1299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

82.1

24.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

84.9

0.79

0.8

83.9

30.9

Minor 5ss

31.3

-2.1

2.7

33.5

35.5

Minor BPS

47.8

-0.3

1.7

53.81

41.2

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346