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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4852205_4854428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4852205 - 4854428

Intron Length:

2224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGCAT

5'SS Class:

major

3'SS Sequence:

TCCTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAAATATTAATA

Flanking Amino Acid:

LVDKNQQNCQEMENHHNISN

Intron Amino Acid Position:

1099

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

62.9

43.2

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

85.7

0.8

83.6

31.5

Minor 5ss

30.4

-2.2

3.7

46.2

49.1

Minor BPS

54.7

0.14

1.6

63.35

36.3

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346