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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4862172_4862789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4862172 - 4862789

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

AATTTTTTAACA

Flanking Amino Acid:

VDCPSEMDKQITPSGYSESF

Intron Amino Acid Position:

752

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

83.8

27.2

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

78.3

0.64

74.1

39.5

Minor 5ss

33.7

-1.9

3.4

48.7

47.5

Minor BPS

76.8

0.84

78.45

31.2

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000007141

4826994 - 4905339

78346