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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4862838_4863549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4862838 - 4863549

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AAATTTGTAATT

Flanking Amino Acid:

NSQFYERVSQVCLQLSVDCP

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

71.8

0.49

0.9

39.7

Minor 5ss

35.1

-1.7

3.5

50.3

46.3

Minor BPS

49.8

0.07

1.9

67.51

37.8

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346