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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4863646_4868722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4863646 - 4868722

Intron Length:

5077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATACTTTGTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CATTCCATACTT

Flanking Amino Acid:

EALKILNQSKFLETTEEPVM

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

70.3

0.46

66.1

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

54.4

0.22

1.9

73.88

43.1

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346