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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4868852_4870343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4868852 - 4870343

Intron Length:

1492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGATC

5'SS Class:

major

3'SS Sequence:

TTGGGTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGGAT

U12 Branch Point Sequence:

TGGATGTTACCA

Flanking Amino Acid:

QLSLEELKKKVTDLLLMVKD

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

71.4

38.2

Major BPS

63.6

0.34

1.4

63.4

44.3

Major PPT

71.9

0.49

1.1

69.2

46.1

Minor 5ss

-0.8

3.1

60.3

44.4

Minor BPS

44.3

-0.4

2.2

55.93

43.3

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346