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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4870460_4872045_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4870460 - 4872045

Intron Length:

1586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTGTATA

5'SS Class:

major

3'SS Sequence:

GTTATTTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

ATTTTCTGAAAT

Flanking Amino Acid:

DQIKDVKNRRDETLSFCGDQ

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.3

79.7

35.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

76.1

0.59

72.3

42.5

Minor 5ss

40.8

-1

2.6

51.4

45.1

Minor BPS

68.6

0.66

1.5

84.64

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007141

4826994 - 4905339

78346

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346