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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4874914_4881395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4874914 - 4881395

Intron Length:

6482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TTTTTTCCATTT

Flanking Amino Acid:

SIIRIVREVEEKKESEYEKL

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.4

1.02

0.7

87.4

21.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

83.2

0.75

0.8

82.8

27.9

Minor 5ss

39.3

-1.2

2.9

45.2

Minor BPS

46.4

-0.1

72.06

39.6

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346