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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4881567_4882398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4881567 - 4882398

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTGTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAA

U12 Branch Point Sequence:

TTTTGCAAAACC

Flanking Amino Acid:

SVNQKDLLLQNLDETIKEKD

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

65.8

0.39

1.4

77.7

37.1

Major PPT

82.4

0.73

0.9

84.8

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

50.9

0.01

2.3

75.32

41.4

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346