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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4882567_4887888_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4882567 - 4887888

Intron Length:

5322

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTTATTATC

5'SS Class:

major

3'SS Sequence:

TCATTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GATTTGCTAATT

Flanking Amino Acid:

QKSRSDKAINDLRNQLEKLH

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.3

72.2

37.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

84.2

0.77

0.7

80.7

Minor 5ss

39.1

-1.2

2.7

52.5

Minor BPS

47.7

-0.1

2.3

70.19

40.9

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346