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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4888108_4889758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4888108 - 4889758

Intron Length:

1651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTACCCTTATAG

Flanking Amino Acid:

THKAHMQKFKGAEDYQALLI

Intron Amino Acid Position:

360

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.83

0.8

84.8

35.4

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

55.9

0.05

1.8

63.56

43.5

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346