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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4889852_4890460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4889852 - 4890460

Intron Length:

609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGACGT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTACTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TTTTACTTTACT

Flanking Amino Acid:

TVALKAKEKENEELGSEIED

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

68.1

42.8

Major BPS

84.8

0.86

85.7

34.9

Major PPT

69.2

0.43

1.1

68.2

36.3

Minor 5ss

39.8

-1.1

3.1

47.1

Minor BPS

73.7

0.83

1.8

93.69

33.8

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346