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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4890581_4891012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4890581 - 4891012

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TAATCTAATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TTTGACATAATC

Flanking Amino Acid:

ERNSFEKKIQSLQEELQERE

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.3

1.07

0.7

84.4

33.5

Major BPS

85.7

0.89

0.8

22.2

Major PPT

66.5

0.37

64.4

41.1

Minor 5ss

36.9

-1.5

51.2

45.2

Minor BPS

55.5

0.15

1.9

72.3

38.8

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346