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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4891067_4892222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4891067 - 4892222

Intron Length:

1156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAC

U12 Branch Point Sequence:

CTTTACTTGACC

Flanking Amino Acid:

LRHEKDSEIEAIRMELKNER

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

29.3

Major BPS

0.6

65.6

41.1

Major PPT

85.5

0.8

0.7

80.8

31.3

Minor 5ss

26.1

-2.7

2.9

29.9

43.2

Minor BPS

71.8

0.67

1.5

78.93

36.7

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007141

4826994 - 4905339

78346

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346