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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4892386_4894297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4892386 - 4894297

Intron Length:

1912

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTATAATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATTTTATAATT

Flanking Amino Acid:

LHMIAGADKDRLIEQLNLSL

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.2

84.6

33.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

0.63

0.9

75.6

38.2

Minor 5ss

34.8

-1.7

3.1

49.5

46.3

Minor BPS

60.6

0.41

1.5

75.94

34.6

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346