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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4898149_4898842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4898149 - 4898842

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTATGTGTT

5'SS Class:

major

3'SS Sequence:

TCTTATGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTACTTTCATT

Flanking Amino Acid:

DGPTDEIYKINIELKVEIES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

72.6

36.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.2

0.61

0.9

69.4

41.4

Minor 5ss

47.3

-0.3

3.2

72.1

39.1

Minor BPS

64.8

0.55

1.7

84.21

37.1

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346