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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4898954_4903363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4898954 - 4903363

Intron Length:

4410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

TCCTATTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

ATTTTCCTATTT

Flanking Amino Acid:

RARTMKDYENQISDLKKENF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

68.9

43.8

Major BPS

0.72

78.4

31.2

Major PPT

80.3

0.68

0.8

Minor 5ss

40.1

-1.1

2.8

47.9

41.4

Minor BPS

55.7

0.26

1.9

78.59

37.9

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346

ENSAPLT00000043498

4834299 - 4905339

71041