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Intron Name: Anas_platyrhynchos_platyrhynchos_18_4903432_4905067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4903432 - 4905067

Intron Length:

1636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

CTCTAACGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

TTTTCTCTAACG

Flanking Amino Acid:

DPQLGPAGSRGLPDVAEDTI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

76.1

39.5

Major BPS

72.3

0.55

73.3

28.9

Major PPT

64.5

0.33

58.6

Minor 5ss

32.6

-2

3.1

40.4

45.5

Minor BPS

72.1

0.56

1.7

80.09

35.8

Associated Gene:

Gene:

CDK5RAP2

Ensembl Gene ID:

ENSAPLG00000006791

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043498

4834299 - 4905339

71041

ENSAPLT00000034842

4826994 - 4905339

78346

ENSAPLT00000007141

4826994 - 4905339

78346