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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5133836_5135274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5133836 - 5135274

Intron Length:

1439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGAAA

U12 Branch Point Sequence:

TGGGTATGAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

57.6

0.19

1.3

67.9

36.3

Major PPT

77.2

0.61

0.8

71.5

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

43.3

-0.5

1.8

51.18

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958