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Intron Name: Anas_platyrhynchos_platyrhynchos_18_5135383_5153179_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5135383 - 5153179

Intron Length:

17797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

TAATCTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GCTTTTTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

62.5

43.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.5

0.46

0.9

62.7

39.1

Minor 5ss

33.7

-1.9

37.8

40.8

Minor BPS

69.6

0.59

1.2

69.9

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044588

5133245 - 5176202

42958